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Tag Archives: genomics
How do you use genome-wide diversity in conservation?
Measuring how genome-wide diversity matters to threatened species has been a constant endeavor of conservation genetics, and still is in the era of genomics. But what should we do with the fact that it often do not correlate with IUCN Red List categories, a measure of species’ threat status? Continue reading
What should conservation genomics researchers do about The Gap?
People may forget what you exactly said on your paper, but they won’t forget how your paper makes them feel. I don’t know whose adage that is I was modifying exactly, that perfectly sums my experience with a paper by … Continue reading
Posted in Uncategorized
Tagged academia, conservation, conservation genetics, funding, genomics, interdisciplinary
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In the pipeline – Part 1: ‘Plan, plan, and plan some more’
So you’ve decided it’s time to finally get around to starting that sequencing project. But before you aimlessly leap into it and generate terabytes of sequencing data, just STOP. It’s far too tempting to rush into sequencing projects for a … Continue reading
Posted in bioinformatics, evolution, genomics, howto, methods, population genetics, Uncategorized
Tagged assembly, bioinformatics, genetics, genomics, In the pipeline, population genetics, Sequencing
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Can small populations benefit genetic rescue?
The core dogma of conservation biology is clear: small populations are bad for species’ persistence. If we observe a population of endangered vertebrates harboring abundant deleterious mutations but without any reduction in fitness, what is happening there? I would like … Continue reading
It’s the city life for me… or maybe not.
Michael Fitch wrote this post as part of Dr. Stacy Krueger-Hadfield’s Evolution course at the University of Alabama at Birmingham. He completed a B.S. in Biology from the UAB and is currently considering entering the Master’s program. Current interests… all over … Continue reading
Asteroids and Pandemics
For whatever reason, viral disease and pandemics have been on my mind, so it’s no surprise that a recent paper in Molecular Ecology caught my attention. It blends the existential dread of global pandemics with the increasing panic concerning the … Continue reading
Inbreeding and the cougar genome
This week, some of my favorite #scicomm games on Twitter are teaming up with March Mammal Madness to reveal this year’s #2020MMM contestants in my favorite “battle of the fittest.” Specifically, today (2/21/2020) at 12:30 pm EST, Dr. Michelle LaRue … Continue reading
Posted in conservation, genomics, mammals
Tagged cats, conservation genetics, genome, genomics, mammals
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Towards unrestricted use of public genomic data
Last week, a friend sent me this policy forum article published in Science. Fifty co-authors, mostly tenured and from prestigious universities, some of them among my dearest idols, have written this piece to call for publicly available genome data. What … Continue reading
Posted in career, community, data archiving, genomics, science publishing
Tagged career, genomics, open science
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