Category Archives: fieldwork

Snapshots of Biodiversity: eDNA as a methodology for species detection

Nicole Conner wrote this post as a project for Stacy Krueger-Hadfield’s Conservation Genetics course at the University of Alabama at Birmingham.  She is a Master’s student in Dr. Thane Wibbels’ lab where she is developing new protocol to detect diamondback terrapins off … Continue reading

Posted in bioinformatics, blogging, citizen science, community, conservation, DNA barcoding, ecology, evolution, fieldwork, metagenomics, natural history | Tagged , , , , | Leave a comment

Genetics of Returning Turtles

Amy Bonka wrote this post as a project for Stacy Krueger-Hadfield’s Conservation Genetics course at the University of Alabama at Birmingham. Amy grew up in Florida, completed a BS in Biology with a concentration in Marine Science and Chemistry as well … Continue reading

Posted in blogging, citizen science, conservation, DNA barcoding, ecology, evolution, fieldwork, methods, natural history, Science Communication | Tagged , , , , | Leave a comment

Kelp forests: the underwater woodlands

Aisha O’ Connor wrote this post as a project for Stacy Krueger-Hadfield’s Conservation Genetics course at the University of Alabama at Birmingham. She sat in on lectures while she was at UAB as part of a British Phycological Society Student Bursary … Continue reading

Posted in blogging, ecology, evolution, fieldwork, haploid-diploid, natural history, population genetics, Science Communication | Tagged , , , , , , | Leave a comment

Conference catch-up: The many colors of snow

Red snow … watermelon snow … green snow … did you know that snow came in so many different colors? I had never heard of watermelon ice (#🍉❄) until a talk given by Robin Kodner from Western Washington University at … Continue reading

Posted in adaptation, bioinformatics, citizen science, community ecology, evolution, fieldwork, mating system, microbiology, natural history, phylogenetics, phylogeography, population genetics, selection, speciation, transcriptomics | Tagged , , , , , , , , , , , , | Leave a comment

Metabarcoding for every body, every habitat, every time

The immediate reason why I wanted to write about Boosting DNA metabarcoding for biomonitoring with phylogenetic estimation of operational taxonomic units’ ecological profiles is its usefulness for the scientific community and the effort of the authors to make their study reproducible. … Continue reading

Posted in bioinformatics, community, community ecology, DNA barcoding, fieldwork, metagenomics, next generation sequencing, phylogenetics, R | Tagged , , , , , , | Leave a comment

Field notes from city streets

I spent this morning in Los Angeles city parks, pulling up clover. This attracted less attention than you might expect. Angelenos are, as a group, not inclined to bother people who aren’t doing anyone else any obvious harm, and honestly … Continue reading

Posted in adaptation, fieldwork, plants | Tagged , , , | 1 Comment

La vie en rouge … l’algue rouge

Best laid plans of a #NewPI … what happens to them? Well, they often get triaged for more urgent things that were triaged earlier for more urgent things that were also triaged even earlier for more urgent things … and … Continue reading

Posted in adaptation, bioinformatics, blogging, conferences, evolution, fieldwork, haploid-diploid, mating system, natural history, population genetics, selection | Tagged , , , , , , , , | Leave a comment

Best practices in sample naming

Wherein I try to save me from myself Let’s imagine a young scientist, bursting to the seems with enthusiasm and schemes to uncover the secrets of the biological world. Everything is new and she learns as she goes! Let’s call … Continue reading

Posted in data archiving, fieldwork, howto, methods | Tagged , | 2 Comments

Diving deep: Exploring microbial communities under the seafloor

As we all sat staring at three large monitors in the front of the room, the remotely operated vehicle (ROV) Jason hung on to a borehole observatory with one hydraulic arm as the other arm plugged our sampling equipment into … Continue reading

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0.80994 leagues under the sea

After a month on the water (and a few weeks getting my land legs again), I’m happily settling back in at home. I just returned from an expedition to a site known as North Pond along the western flank of … Continue reading

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