Category Archives: evolution

Phonemes and Genomes

Human phonemes and genomes are thought to have evolved hand-in-glove out of Africa. Several recent studies have attempted to capture a picture of this global variation in languages and peoples, often supporting (and rejecting) a serial founder model (eg. see … Continue reading

Posted in bioinformatics, evolution, genomics, phylogenetics, population genetics | Tagged , , , | 1 Comment

Night at the museum

Many population genetic and genomic studies document snapshots of a given population’s genetic diversity. Yet, there are many reasons to document changes over time in population parameters in response to perturbations, such as biological invasions (both in terms of the invader … Continue reading

Posted in DNA barcoding, evolution, genomics, natural history, next generation sequencing, phylogenetics, population genetics, speciation, Uncategorized | Tagged , , , | Leave a comment

From crocodiles to coconuts

The first plant trypanosomatids were discovered in plant tissues over 100 years ago, but we know very little about their biology, life cycle or how they have adapted to life inside plants. Jaskowska et al. (2015) provide a review of … Continue reading

Posted in adaptation, Coevolution, evolution, genomics, natural history | Leave a comment

Estimating the ticks and tocks of molecular clocks

Like many undergraduate students, I learned about the linear, universal molecular clock: the homogeneous rate of nucleotide change over time. When I sat down to actually do analyses of molecular data, I was confounded by the array of options to treat DNA … Continue reading

Posted in evolution, Molecular Ecology, the journal, mutation, software | Tagged | Leave a comment

Sex chromosome evolution … in haploids, that is

In diploid organisms, the rates of mutation and recombination played a pivotal role in the evolution of sex-determining regions and, thus, sex chromosomes.  We know quite a bit theoretically and empirically in XY systems in mammals and ZW systems in … Continue reading

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